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Dissertation
Differential long-range input pathways in the retrosplenial cortex along the anterior-posterior axis
Authors: --- --- ---
Year: 2023 Publisher: Leuven KU Leuven. Faculteit Wetenschappen

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Abstract

Humans and animals locate and navigate themselves by linking their position to their surroundings. Spatial navigation is a cognitive function in the brain, that makes it possible to do this. By studying the role of navigation, many brain areas have been described to contribute to this. Recent research described the role of the retrosplenial cortex (RSC) in navigation. The RSC is a cortical brain area, that can be subdivided into a granular and dysgranular region. In rodents, the RSC is located more dorsally in the brain resulting in interconnections with many other brain regions. The RSC receives information from brain areas, including the hippocampus, thalamic nuclei, anterior cingulate area and both visual- and motor cortex. Because of these connections, the RSC is involved in spatial navigation. It is suggested that there is a functional difference between the anterior and posterior RSC. Recent research in the Bonin Lab confirms this difference, by indicating that the neurons of the anterior RSC are more linked to spatially modulated areas. While neurons of the posterior RSC are more linked to visual representations. In this project, we hypothesize that there is a difference between long-range input pathways to the anterior and posterior RSC. We performed an optimized retrograde dual labeling approach to label and quantify individual input neurons. In this way, we were able to get a full brain registration and we could observe which areas provide input to the RSC. Our findings confirmed our hypothesis, showing the anterior RSC received more spatial input, while the posterior RSC received more visual input.

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Dissertation
Does astroglial scarring limit the quality of chronic neural recordings? : A combined imaging and electrophysiological study
Authors: --- --- --- ---
Year: 2020 Publisher: Leuven KU Leuven. Faculty of Medicine

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Implantable silicon-based neural probes for high-density neural recordings are important tools for the investigation of neurophysiological systems. However, progress in the application of probes to chronic implants has been hampered by two important challenges: (1) the progressive degradation of the probe/tissue interaction, which results in decreasing recording quality over time, (2) an adequate assessment tools for studying chronic neuroinflammatory reaction and probe performance. To overcome these challenges, we need a method to visualize the structure and function of the tissue surrounding the probe while implanted in the living brain. Therefore, I will (1) develop and validate a rodent cellular imaging assay to study the foreign body response in chronic neural implants, and (2) 1.investigate the relation between glial scarring and quality of neural recordings from chronically implanted silicon probes. These results will provide the necessary information to direct the development of probes with improved long-term recording capabilities. The project will be performed in NERF (Bonin lab) with probe technology from imec (CTT team) and in collaboration with KULeuven (Bart Nuttin) and imec (Liesbet Lagae).

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Dissertation
The Role of the Lateral Posterior Nucleus of the Thalamus in Sensory Selection in Mice: Visual cortical activity with silenced LP
Authors: --- --- ---
Year: 2022 Publisher: Leuven KU Leuven. Faculteit Wetenschappen

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Throughout the day we receive a constant flow of multisensory inputs. Therefore, the brain needs to select relevant sensory information and ignore the distracters to be able to produce a proper behavioural response. This is an active process called sensory selection. However, the question “How does the brain select between relevant and irrelevant information?” remains unanswered. In this thesis, I took a first step toward studying the role of the lateral posterior nucleus (LP) of the thalamus in sensory selection in mice. LP is a higher-order thalamic nucleus with reciprocal connections with primary and higher cortical areas. In addition to relaying information, it can combine information from multiple regions. This suggests that it is uniquely positioned to modulate cortical processing. However, its contribution to sensory selection remains poorly understood. This thesis had three aims: 1) reliable targeting of LP using stereotaxic injections 2) retinotopic mapping of higher visual areas using intact skull wide-field imaging and 3) characterize the impact of chemogenetic silencing of LP on population dynamics in cortical visual areas. To achieve this aims, we performed Cholerin toxin subunit B tracer injections. Further, we made retinotopic maps of the visual cortex and silenced LP chemogenetically during stimulation of the visual cortex. As last, we injected a halorhodopsin driving virus into LP to check its expression and performed a preliminary experiment of optognetic silencing. Together, results showed that: 1) viral injection into LP is possible with great caution and precision, 2) that retinotopic mapping through an intact skull is reliable, and 3) that chemogenetic silencing is probably not the most effective method for the scope of this project, as examining sensory selection would require greater spatial precision and temporal control during silencing.

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Dissertation
Long-range inputs to the mouse retrosplenial cortex along the rostro-caudal axis
Authors: --- --- ---
Year: 2022 Publisher: Leuven KU Leuven. Faculteit Wetenschappen

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When we go running, or go to work, we navigate without using Google maps on our smartphones. The process that enables us to navigate relies on a cognitive map inside the brain, and is referred to as spatial navigation. This map represents the individual’s knowledge of the relationship of the environment to space. Several brain regions are known to be involved. The cognitive map of the environment requires constant updating with the incoming sensory information. However, the different brain regions involved in this process do not directly encode for sensory information. It is stated that the retrosplenial cortex (RSC), a subdivision of the cortex located caudally around the corpus callosum, could encoded for this information. Recently, more research has been devoted to the anatomical and functional characteristics of the RSC, in spatial navigation. Several researchers reported (reciprocal) connections between the RSC and other spatially involved brain regions, such as the hippocampal and parahippocampal formation, and the posterior parietal cortex. Connections between sensory areas and the RSC have also been described, and include the primary visual -, primary motor -, and primary somatosensory cortices. The RSC appears to play a role in spatial memory and learning, and in encoding and storing of spatial information. Furthermore, a recent finding at the Bonin’s lab supports a functional difference in the RSC along the rostro-caudal axis. More spatially selective cells are found in the anterior RSC, whereas more visually selective cells are found in the posterior RSC. We optimized a retrograde dual labeling approach to investigate if this functional difference is mediated by an anatomical difference between the long-range input pathways along the rostro-caudal axis. We injected Cholera toxin subunit B (CTB) tracers conjugated to Alexa Fluor (AF) fluorescent probes (CTB 488, CTB 555) into the RSC of mice, to label individual neurons in the areas that provide input. This individual retrogradely-labeled cells were quantified to map out all the brain regions that provide anterior and/or posterior input to the RSC. We hypothesized that the anterior RSC receives spatial inputs, while the posterior RSC receives visual inputs. However, our findings did not confirm this hypothesis. We found that the somatosensory and motor cortices provided most of the inputs to the anterior RSC, while the spatial areas provided mainly spatial inputs to the posterior RSC. Nevertheless, projections from spatial areas to the anterior RSC were also observed, but to a lesser extent. Visual areas also provided some projections to the posterior RSC, which is consistent with our hypothesis. However, only one mouse was used to obtain these results, which means that only preliminary conclusions can be drawn so far. More data, along with further optimization of the protocol, would result in more reliable results that would fit the hypothesis.

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Dissertation
Impact of locomotion on contrast coding in the early visual system
Authors: --- ---
Year: 2019 Publisher: Leuven KU Leuven. Faculty of Medicine

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Dissertation
Assessing the role of higher-order thalamic nuclei in visual cortical activity in mice
Authors: --- --- ---
Year: 2023 Publisher: Leuven KU Leuven. Faculteit Wetenschappen

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In daily life, our brains are exposed to constant information flow from our senses. However, processing all this information costs a lot of energy. Therefore, it is critical to prioritize relevant information and filter out distractions. This process is called “sensory selection” and involves the interplay between different brain areas such as the cortex and thalamus. In this study, we focused on a specific region of the thalamus called the lateral posterior nucleus (LP) and its role in visual information processing. We used a method called optogenetics which is based on the use of light to inhibit the activity of LP in mice. By suppressing the activity of LP, we could observe how this suppression influences the neuronal dynamics in the visual cortex. Our results showed that when LP activity is suppressed, the neuronal dynamics in the visual cortex significantly changed. These changes were specific to certain visual stimuli with different properties. However, the results showed variations among the subjects. Therefore, experiments with more animals are required to understand the relationship between LP and the visual cortex better. In summary, this study contributes to the understanding of how the brain prioritizes one sensory information over the other and how different parts of the brain communicate with each other. Understanding these processes can improve our knowledge of certain neurodevelopmental disorders such as autism spectrum disorder and attention deficit hyperactivity disorder (ADHD) which are known to involve deficits in sensory processing.

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Dissertation
On processing of visual motion : How arousal and locomotor state shape neuronal tunings in the mouse visual thalamus
Authors: --- ---
Year: 2020 Publisher: Leuven KU Leuven. Faculty of Medicine

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Dissertation
Specialised visual representations and long-range communication pathways in the mouse visual cortex
Authors: --- ---
Year: 2021 Publisher: Leuven KU Leuven. Faculty of Medicine

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