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This is a treatment of the statistical methods used in molecular evolution and phylogenetics study. Newly developed statistical methods for studying the molecular clock, adaptive evolution and inference of ancestral amino acid sequences are also included.

Evolutionary genetics --- Molecular evolution --- Statistical methods. --- Biochemical evolution --- Chemical evolution --- Genetic evolution --- Evolution --- Life --- Molecular biology --- Evolution (Biology) --- Genetics --- Origin --- Statistical methods --- Génétique évolutive --- Evolution moléculaire --- Méthodes statistiques --- Evolutionary genetics - Statistical methods --- Molecular evolution - Statistical methods --- Phylogeny.